Fitness data for PP_2615 in Pseudomonas putida KT2440

hemolysin-coregulated protein
SEED: Hcp
KEGG: type VI secretion system secreted protein Hcp

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)

group	condition	fitness	t score
stress	Growth with Chloride 200 mM; with MOPS	-3.8	-2.5	compare
carbon source	L-Lysine (C)	-1.9	-2.2	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.9	-2.7	compare
nitrogen source	Ammonium chloride (N)	-1.8	-2.2	compare
phage	P. put South MOI 10	-1.7	-1.3	compare
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.7	-1.6	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.6	-1.8	compare
nitrogen source	Propandiamine (N)	-1.5	-1.9	compare
carbon source	D-Glucose (C) with 20AA_mix_minus_His	-1.5	-2.7	compare
carbon source	Sebacic (C)	-1.4	-2.6	compare
phage	PUT8 MOI 0.1	-1.4	-1.4	compare
carbon source	M9 minimal media_noCarbon with D-Glucose 10 mM; 30C; then outgrowth in LB	-1.3	-2.9	compare
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-1.3	-1.7	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2	-2.1	compare
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	+1.3	+2.9	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.4	+1.6	compare
carbon source	Valerolactone (C)	+1.4	+1.9	compare
nitrogen source	D-2-Aminobutyric (N)	+1.4	+1.1	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+1.5	+1.1	compare
phage	P. putida Sci Big MOI 0.1	+1.9	+1.6	compare