Fitness data for PP_2613 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.5 -2.8 compare
phage P. putida Sci small MOI 0.1 -0.5 -0.9 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -2.2 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.5 -2.4 compare
nitrogen source Propandiamine (N) -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.6 compare
stress Butyrolactam 2 vol% -0.5 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.2 compare
lb outgrowth control more dilute start LB outgrowth control more dilute start -0.5 -2.8 compare
carbon source Ethyl decanoate and D-Glucose (C)s -0.5 -2.5 compare
pH pH 9 -0.5 -1.4 compare
stress Butanol 0.6 vol% +0.4 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.2 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.5 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.1 compare
carbon source D-Glucose (C) +0.5 +1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.5 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.1 compare