Fitness data for PP_2596 in Pseudomonas putida KT2440

putative ABC transporter, permease/ATP-binding protein
SEED: Lipid A export ATP-binding/permease protein MsbA
KEGG: ATP-binding cassette, subfamily B, bacterial

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -1.9 compare
nitrogen source D-2-Aminobutyric (N) -0.9 -2.5 compare
nitrogen source nitrogen source nitrite 0.5mM -0.7 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.3 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.6 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.0 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.5 -1.9 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.3 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.5 -2.1 compare
no phage control Time6-nophage -0.5 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.7 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.5 +2.6 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.5 +2.3 compare
pH Growth at pH9 and (C) D-Glucose +0.5 +2.8 compare
nitrogen source Ammonium chloride (N) +0.5 +1.8 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.5 +2.4 compare
pH Growth at pH6 and (C) D-Glucose +0.6 +2.5 compare
carbon source ferulate (C); with MOPS +0.6 +2.1 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.5 compare