Fitness data for PP_2593 in Pseudomonas putida KT2440

Ferric siderophore ABC transporter, permease protein
SEED: Iron compound ABC uptake transporter permease protein PiuC
KEGG: iron complex transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -2.0 -2.5 compare
phage P. putida PUT 7 MOI 1 -1.4 -2.7 compare
nitrogen source 2,6-diaminopimelic (N) -1.0 -1.7 compare
nitrogen source nitrite (N) -1.0 -1.9 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.9 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -2.5 compare
nitrogen source Urea (N) -0.8 -2.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.8 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.8 compare
nitrogen source nitrogen source nitrate 5mM -0.6 -2.1 compare
nitrogen source Urea (N) -0.6 -1.7 compare
stress limonene 10 vol% -0.6 -3.1 compare
carbon source D-Glucose (C) +0.7 +1.7 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.7 +3.2 compare
carbon source carbon source D-Glucose 55.5 mM +0.7 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.4 compare
pH pH 6 +0.9 +3.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +1.6 compare