Fitness data for PP_2588 in Pseudomonas putida KT2440

Aminotransferase, class III

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.5 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.7 compare
microaerobic m9 microaerobic M9 -0.4 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.3 compare
carbon source DL-3-Hydroxyisobutyric (C) -0.4 -2.4 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.4 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.4 compare
carbon source D-Lysine 10 mM (C) -0.4 -1.9 compare
anaerobic m9 anaerobic M9 -0.4 -2.5 compare
carbon source acetate (C) +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.9 compare
pH Growth at pH9 and (C) Trisodium citrate +0.4 +1.7 compare
phage P. putida South MOI 0.1 +0.4 +2.5 compare
nitrogen source nitrate (N) +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.9 compare
phage P. putida Sci Big MOI 0.1 +0.5 +1.6 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.6 +2.6 compare