Fitness data for PP_2585 in Pseudomonas putida KT2440

Alpha-ketoglutaric semialdehyde dehydrogenase
SEED: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
temperature shift Temperature shift 10_to_25; with MOPS -1.2 -2.8 compare
phage P. putida Sci Big MOI 0.1 -1.2 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -2.7 compare
carbon source ferulate (C); with MOPS -1.1 -1.8 compare
nitrogen source nitrite (N) -1.0 -3.4 compare
pH Growth at pH6 and (C) Trisodium citrate -1.0 -3.7 compare
pH Growth at pH7 and (C) D-Glucose -1.0 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.9 compare
stress R2A with Fusaric 240 ug/mL -0.9 -2.9 compare
nitrogen source nitrate (N) -0.9 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.9 -1.6 compare
pH Growth at pH9 and (C) D-Glucose -0.9 -2.9 compare
carbon source 4-Aminobutyric 10 mM (C) -0.9 -2.3 compare
temperature Growth at 30C -0.9 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.1 compare
pH Growth at pH8 and (C) D-Glucose -0.8 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -1.8 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -1.3 compare
carbon source ferulate (C); with MOPS -0.7 -1.5 compare
carbon source 4-Methyl-2-oxopentanoic (C) +0.9 +3.3 compare