Fitness data for PP_2582 in Pseudomonas putida KT2440

putative Heme oxygenase
SEED: Heme oxygenase HemO, associated with heme uptake

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
pH pH 6 -1.1 -2.1 compare
temperature Growth at 25C; with MOPS -1.1 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.0 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.2 compare
pH Growth at pH9 and (C) Trisodium citrate -1.0 -1.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.0 -2.2 compare
no stress control Growth with no stress -1.0 -3.4 compare
nitrogen source Urea (N); with MOPS -1.0 -3.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.9 -1.8 compare
carbon source butyrate (C) -0.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9 -3.0 compare
carbon source Myristic (C) -0.9 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.9 -2.0 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.8 -2.2 compare
carbon source Delta-Undecalactone (C) -0.8 -3.8 compare
carbon source 5-Aminovaleric 10 mM (C) -0.8 -1.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.8 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +3.4 compare