Fitness data for PP_2561 in Pseudomonas putida KT2440

putative secreted hemolysin-type calcium-binding bacteriocin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -0.4 -2.8 compare
pH pH 7 -0.3 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.3 -1.8 compare
nitrogen source D-2-Aminobutyric (N) -0.3 -1.9 compare
carbon source carbon source D-Glucose 55.5 mM -0.3 -1.8 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.3 -1.9 compare
phage P. putida Missley MOI 0.1 -0.3 -1.6 compare
carbon source carbon source Bisabolol 45 mM -0.3 -2.0 compare
carbon source carbon source Bisabolene 48.9 mM -0.2 -1.7 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.2 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.2 -1.4 compare
carbon source L-Phenylalanine 5 mM (C) -0.2 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.2 -1.3 compare
pH Growth at pH7 and (C) D-Glucose -0.2 -1.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.3 compare
carbon source L-Lysine (C) +0.2 +1.5 compare
carbon source ferulate (C); with MOPS +0.2 +1.4 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.2 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +2.0 compare