Fitness data for PP_2559 in Pseudomonas putida KT2440

Metalloprotease secretion protein
SEED: ABC exporter for hemopore HasA, membrane fusion protein (MFP) family component HasE
KEGG: protease secretion protein HasE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -1.3 -1.8 compare
carbon source D-Fructose (C) -1.0 -3.0 compare
pH Growth at pH6 and (C) Trisodium citrate -1.0 -1.6 compare
carbon source Heptanoic (C) -0.9 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8 -2.3 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.8 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -0.8 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.0 compare
nitrogen source Urea (N); with MOPS -0.8 -1.7 compare
nitrogen source Urea (N) -0.7 -2.2 compare
carbon source Myristic (C) -0.7 -0.9 compare
temperature Growth at 30C; with MOPS -0.7 -2.6 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.7 -2.7 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -0.7 -2.1 compare
nitrogen source NAG (N); with MOPS +0.7 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.5 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.7 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.5 compare
temperature Growth at 25C; with MOPS +0.9 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.0 compare