Fitness data for PP_2552 in Pseudomonas putida KT2440

DOPA decarboxylase
SEED: Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28)
KEGG: aromatic-L-amino-acid decarboxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -3.8 -9.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -3.0 -8.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.9 -3.4 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.7 -4.2 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -2.4 compare
phage P. putida Sci Big MOI 0.1 -0.6 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.8 compare
nitrogen source Urea (N) -0.5 -2.6 compare
phage PUT8 MOI 0.1 -0.5 -2.1 compare
nitrogen source nitrogen source nitrite 0.5mM -0.5 -2.1 compare
carbon source Crotonic (C) -0.5 -2.0 compare
temperature Growth at 34C -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -2.2 compare
pH pH 9 +0.5 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.2 compare
pH pH 5 +0.6 +2.3 compare