Fitness data for PP_2546 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: putative membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -1.1 -2.7 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -2.7 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.9 -3.0 compare
phage P. putida Sci small MOI 0.1 -0.9 -1.2 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.9 -3.8 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.9 -2.8 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.9 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.4 compare
pH Growth at pH7 and (C) Trisodium citrate -0.7 -1.8 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.7 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -2.4 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.6 -1.8 compare
carbon source Valerolactone (C) -0.6 -1.6 compare
stress 1-Pentanol 0.3 vol% +0.6 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.6 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.7 +2.5 compare
pH Growth at pH6 and (C) D-Glucose +0.7 +2.1 compare