Fitness data for PP_2535 in Pseudomonas putida KT2440

putative inner membrane transport protein
SEED: Putative transport protein
KEGG: MFS transporter, DHA1 family, arabinose polymer transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -1.2 -1.7 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.9 -2.3 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.8 compare
carbon source ferulate (C); with MOPS -0.8 -1.5 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.8 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -1.9 compare
nitrogen source Urea (N); with MOPS -0.6 -1.5 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.5 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.4 compare
nitrogen source Imidazole (N) -0.6 -2.5 compare
nitrogen source nitrogen source nitrite 0.5mM +0.6 +1.7 compare
carbon source Valerolactone (C) +0.6 +2.0 compare
nitrogen source nitrite (N) +0.6 +2.0 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.6 +3.4 compare
pH pH 7 +0.7 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.8 +2.1 compare
pH pH 6 +0.8 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.8 +1.9 compare