Fitness data for PP_2525 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: putative RecF protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -3.6 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.6 -1.7 compare
pH Growth at pH7 and (C) Trisodium citrate -1.5 -1.5 compare
pH Growth at pH9 and (C) Trisodium citrate -1.3 -1.4 compare
phage P. putida South MOI 1 -1.3 -3.3 compare
phage P. putida South MOI 10 -1.1 -2.0 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -1.1 -2.4 compare
stress Butyrolactam 2 vol% -1.1 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -1.5 compare
phage P. putida Sci Big MOI 0.1 -1.0 -1.4 compare
nitrogen source no extra (N); with MOPS -1.0 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.0 compare
temperature shift Temperature shift 10_to_30; with MOPS -1.0 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.9 -2.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9 -2.6 compare
nitrogen source nitrogen source nitrite 0.5mM -0.9 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.7 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +1.0 +3.0 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +1.7 compare