Fitness data for PP_2520 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
nitrogen source no extra (N); with MOPS -2.5 -3.8 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -2.2 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.8 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.6 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.4 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -3.5 compare
carbon source D-Glucose (C); with MOPS -1.2 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -2.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.1 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -2.0 compare
phage P. put South MOI 10 -1.1 -1.3 compare
pH Valerolactone (C) pH 6.5 -1.1 -2.1 compare
phage P. putida Missley MOI 0.1 -1.0 -0.8 compare
phage P. put PUT 10 MOI 10 -1.0 -2.0 compare
carbon source Myristic (C) -0.9 -2.4 compare
carbon source D-Glucose (C) -0.9 -1.6 compare
carbon source carbon source D-Glucose 55.5 mM +1.1 +2.2 compare