Fitness data for PP_2518 in Pseudomonas putida KT2440

gallate dioxygenase
SEED: Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
KEGG: protocatechuate 4,5-dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.7 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4 -1.9 compare
stress Growth with Chloride 500 mM; with MOPS -0.4 -2.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.3 -1.7 compare
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.6 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.3 -1.8 compare
lb outgrowth control more dilute start LB outgrowth control more dilute start -0.3 -2.3 compare
nitrogen source Hydantoin (N) +0.3 +2.0 compare
pH pH 7 +0.3 +1.6 compare
temperature Growth at 30C; with MOPS +0.3 +1.5 compare
phage P. putida Sci small MOI 0.1 +0.3 +1.3 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.4 +1.7 compare
pH Growth at pH7 and (C) D-Glucose +0.4 +1.7 compare
carbon source L-Glutamic (C) +0.4 +2.5 compare
phage P. putida PUT 7 MOI 1 +0.4 +1.5 compare
carbon source D-Glucose (C) +0.5 +2.6 compare