Fitness data for PP_2514 in Pseudomonas putida KT2440

4-carboxy-4-hydroxy-2-oxoadipic acid aldolase
SEED: 4-carboxy-4-hydroxy-2-oxoadipate aldolase (EC 4.1.3.17)
KEGG: 4-hydroxy-4-methyl-2-oxoglutarate aldolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.5 -2.6 compare
nitrogen source 2,6-diaminopimelic (N) -1.4 -3.7 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.9 -1.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.9 -2.1 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.8 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -1.4 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.8 -3.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.8 -1.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -0.7 -1.6 compare
no stress control TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1 -0.7 -3.4 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.7 +2.1 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.8 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 +1.6 compare
phage P. putida South MOI 0.1 +0.9 +3.0 compare
nitrogen source D-2-Aminobutyric (N) +0.9 +1.7 compare
carbon source ferulate (C); with MOPS +1.0 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +1.0 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +1.8 compare