Fitness data for PP_2512 in Pseudomonas putida KT2440

GTP cyclohydrolase 1
SEED: GTP cyclohydrolase I (EC 3.5.4.16) type 1
KEGG: GTP cyclohydrolase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Trisodium citrate (C) -1.1 -4.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -3.5 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.7 -3.0 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.3 compare
temperature Growth at 25C -0.5 -1.8 compare
nitrogen source nitrite (N) -0.5 -2.6 compare
carbon source Octanoic (C) -0.5 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.5 compare
nitrogen source NAG (N); with MOPS -0.5 -1.5 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -2.5 compare
carbon source 4-Aminobutyric 10 mM (C) -0.4 -2.4 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.1 compare
nitrogen source nitrate (N) -0.4 -1.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.4 -1.4 compare
carbon source Tween 20 (C) -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
stress Growth with Chloride 200 mM; with MOPS +0.5 +2.8 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.6 +2.4 compare
phage P. putida Sci small MOI 0.1 +0.7 +2.5 compare