Fitness data for PP_2507 in Pseudomonas putida KT2440

Oxidoreductase, short-chain dehydrogenase/reductase family
SEED: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.5 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -2.4 compare
pH Growth at pH7 and (C) D-Glucose -0.8 -1.2 compare
carbon source Tween 20 (C) -0.7 -2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.7 -2.1 compare
temperature shift Temperature shift 10_to_21; with MOPS -0.6 -2.5 compare
carbon source butyrate (C) -0.6 -2.5 compare
phage PUT8 MOI 0.1 -0.6 -2.3 compare
nitrogen source nitrogen source nitrite 0.5mM -0.6 -2.2 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.8 compare
carbon source ferulate (C); with MOPS +0.5 +1.4 compare
phage PUT 8 MOI 1 +0.6 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.8 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.8 +2.9 compare
pH Valerolactone (C) pH 6.5 +0.9 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.9 compare