Fitness data for PP_2498 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -2.3 compare
carbon source carbon source D-Glucose 55.5 mM -1.0 -2.7 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.9 -3.4 compare
carbon source Valerolactone (C) -0.8 -2.4 compare
no stress control Growth with no stress -0.7 -2.2 compare
pH pH 7 -0.7 -1.8 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.5 compare
pH pH 4 -0.6 -2.1 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.9 compare
stress Growth with Chloride 200 mM +0.6 +1.4 compare
carbon source Glucose (C) (20mM) +0.6 +3.0 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.1 compare
phage PUT 8 MOI 1 +0.7 +2.3 compare
phage P. putida Sci Big MOI 0.1 +0.8 +2.4 compare
nitrogen source NAG (N); with MOPS +0.8 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.2 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +1.3 compare