Fitness data for PP_2485 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.8 -2.7 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.6 -2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.5 compare
nitrogen source Ammonium chloride and TNT (N) -0.4 -3.0 compare
carbon source Oleic (C) -0.4 -2.5 compare
carbon source butyrate (C) -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -1.6 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 2 -0.3 -2.7 compare
stress Cholinium lysinate 10 vol% -0.3 -2.4 compare
carbon source D-Glucose (C) -0.3 -1.6 compare
nitrogen source TNT (N) -0.3 -2.4 compare
carbon source 3-methyl-1-butanol (C) -0.3 -2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -2.2 compare
nitrogen source D-2-Aminobutyric (N) +0.3 +1.5 compare
phage P. put South MOI 1 +0.3 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.1 compare
pH Growth at pH6 and (C) D-Glucose +0.4 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.8 compare