Fitness data for PP_2475 in Pseudomonas putida KT2440

Transcriptional regulator, TetR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
carbon source 3-methyl-1-butanol (C) -4.5 -6.9 compare
carbon source 3-methyl-1-butanol (C) -4.3 -7.1 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -4.3 -5.0 compare
nitrogen source Ammonium chloride and TNT (N) -3.7 -2.6 compare
nitrogen source Ammonium chloride and TNT (N) -3.6 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.8 -4.9 compare
nitrogen source Ammonium chloride and TNT (N) -2.7 -4.1 compare
nitrogen source Ammonium chloride and TNT (N) -2.6 -4.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.6 -6.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -2.2 -6.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.1 -3.7 compare
micoeukaryotes C.elegans, mixed culture-2 -2.1 -5.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.1 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.0 -4.7 compare
nitrogen source TNT (N) -2.0 -4.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.9 -2.8 compare
pH Growth at pH9 and (C) Trisodium citrate -1.9 -3.4 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -1.8 -4.8 compare
nitrogen source TNT (N) -1.7 -5.1 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -1.7 -5.5 compare