Fitness data for PP_2459 in Pseudomonas putida KT2440

ribose pyranase
SEED: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
KEGG: D-ribose pyranase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -7.3 -2.5 compare
phage P. putida Sci small MOI 0.1 -2.8 -1.8 compare
stress Growth with Chloride 200 mM -2.5 -1.7 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -2.4 -1.5 compare
phage P. putida South MOI 10 -2.1 -1.3 compare
temperature Growth at 25C -1.6 -1.0 compare
carbon source Myristic (C) -1.5 -1.5 compare
carbon source D-Glucose (C); with MOPS -1.4 -2.7 compare
pH Growth at pH7 and (C) D-Glucose -1.3 -1.5 compare
nitrogen source Urea (N) -1.3 -2.5 compare
nitrogen source no extra (N); with MOPS -1.3 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -1.2 -1.6 compare
carbon source 4-Aminobutyric 10 mM (C) -1.2 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.2 -1.4 compare
carbon source L-Leucine (C) -1.2 -1.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +1.3 +2.6 compare
nitrogen source nitrogen source nitrite 1mM +1.4 +2.6 compare
nitrogen source 2,6-diaminopimelic (N) +1.5 +1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.6 +1.6 compare
nitrogen source Propandiamine (N) +1.7 +2.9 compare