Fitness data for PP_2451 in Pseudomonas putida KT2440

extracellular DNA endonuclease
SEED: Endonuclease I precursor (EC 3.1.21.1)
KEGG: deoxyribonuclease I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -4.4 compare
time series Timeseries; MAX condition; Bioreplicate 1; Time 5hrs; Measurement -0.7 -4.0 compare
nitrogen source NAG (N); with MOPS -0.6 -2.0 compare
r2a control R2A control -0.5 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -2.2 compare
time series Timeseries; NC condition; Bioreplicate 1; Time 5hrs; Measurement -0.5 -3.3 compare
carbon source carbon source D-Glucose 55.5 mM -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.0 compare
carbon source Acetate Carbon Source (20mM) -0.4 -2.7 compare
pH LB 0.1x with 55.5 mM D-Glucose; pH 4.6 -0.4 -2.4 compare
stress R2A with Fusaric 240 ug/mL -0.3 -2.0 compare
stress R2A with Fusaric 240 ug/mL -0.3 -1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.3 -1.7 compare
carbon source ferulate (C); with MOPS +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +2.0 compare
stress Growth with Chloride 200 mM +0.4 +2.2 compare
phage P. putida Sci small MOI 0.1 +0.4 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.2 compare