Fitness data for PP_2426 in Pseudomonas putida KT2440

coniferyl alcohol dehydrogenase
SEED: Alcohol dehydrogenase (EC 1.1.1.1)
KEGG: uncharacterized zinc-type alcohol dehydrogenase-like protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source Propandiamine (N) -2.4 -3.6 compare
carbon source 4-Aminobutyric 10 mM (C) -1.5 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.2 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -1.6 compare
nitrogen source Propandiamine (N) -1.0 -3.0 compare
phage P. putida Sci small MOI 0.1 -1.0 -1.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.0 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.9 -2.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.9 -3.6 compare
carbon source L-Leucine (C) -0.8 -2.3 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.8 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.3 compare
nitrogen source nitrogen source nitrite 1mM -0.7 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7 -2.7 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -0.7 -1.9 compare
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.7 -2.0 compare
carbon source Delta-Nonalactone (C) -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.3 compare