Fitness data for PP_2408 in Pseudomonas putida KT2440

cobalt-zinc-cadmium resistance protein
SEED: Heavy metal RND efflux outer membrane protein, CzcC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -1.1 -2.1 compare
pH pH 7 -1.0 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.5 compare
carbon source L-Phenylalanine 5 mM (C) -0.9 -3.4 compare
carbon source Octanoic (C) -0.9 -2.6 compare
stress R2A with Fusaric 240 ug/mL -0.9 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.8 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.7 -2.0 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7 -2.7 compare
carbon source butyrate (C) -0.7 -2.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -1.4 compare
nitrogen source nitrogen source nitrite 0.5mM -0.7 -2.4 compare
pH Growth at pH8 and (C) Trisodium citrate -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.2 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.6 +2.0 compare
carbon source L-Leucine (C) +0.7 +2.4 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.5 compare