Fitness data for PP_2405 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Thiol-disulfide isomerase and thioredoxins

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.9 -2.1 compare
carbon source ferulate (C); with MOPS -0.8 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -2.2 compare
nitrogen source Propiolactam (N) -0.6 -2.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.9 compare
phage P. putida Sci Big MOI 0.1 -0.6 -1.3 compare
carbon source L-Lysine 10 mM (C) -0.5 -2.0 compare
carbon source 1,3-Butandiol (C) -0.5 -2.0 compare
temperature shift Temperature shift 30_to_21 -0.5 -2.8 compare
carbon source Delta-Nonalactone (C) -0.5 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.3 compare
carbon source L-tyrosine 5 mM (C) -0.5 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5 +2.0 compare
nitrogen source nitrogen source nitrite 0.5mM +0.5 +2.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +1.9 compare
carbon source Tween 20 (C) +0.5 +1.8 compare
stress R2A with Fusaric 480 ug/mL +0.5 +2.2 compare
pH pH 9 +0.5 +1.6 compare
carbon source L-Leucine (C) +0.6 +2.1 compare