Fitness data for PP_2372 in Pseudomonas putida KT2440

putative Periplasmic sugar-binding protein
SEED: Periplasmic sugar-binding domain protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Geraniol 1 vol% -1.1 -6.1 compare
carbon source Sorghum Hydrolysate (C) -0.9 -5.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.6 compare
carbon source Sorghum Hydrolysate (C) -0.6 -3.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.5 -2.7 compare
micoeukaryotes C.elegans, mixed culture-1 -0.5 -2.8 compare
phage PUT8 MOI 0.1 -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
lb LB -0.5 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -3.4 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -0.4 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -1.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.4 -2.1 compare
phage P. put South MOI 10 -0.4 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.5 compare
carbon source ferulate (C); with MOPS +0.5 +2.2 compare