Fitness data for PP_2369 in Pseudomonas putida KT2440

Leucine-rich repeat domain protein
SEED: FIG00955292: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source 4-Aminobutyric 10 mM (C) -0.3 -1.9 compare
phage P. putida PUT 7 MOI 1 -0.3 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.3 -1.2 compare
nitrogen source Caprolactam (N) -0.3 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -1.7 compare
carbon source 3-Hydroxyhexanoic (C) -0.3 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.3 +1.6 compare
carbon source Vanillin (C) +0.3 +1.9 compare
pH Growth at pH7 and (C) D-Glucose +0.3 +1.4 compare
pH Growth at pH6 and (C) D-Glucose +0.3 +1.9 compare
carbon source Sorghum Hydrolysate (C) +0.3 +2.2 compare
stress Growth with Chloride 500 mM; with MOPS +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.3 +1.6 compare
nitrogen source NAG (N); with MOPS +0.3 +1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.6 compare
pH pH 5 +0.4 +2.2 compare
nitrogen source Urea (N); with MOPS +0.4 +2.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +3.1 compare