Fitness data for PP_2362 in Pseudomonas putida KT2440

putative usher protein
SEED: Sigma-fimbriae usher protein
KEGG: outer membrane usher protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.6 -3.2 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.5 +2.8 compare
nitrogen source nitrite (N) +0.5 +3.7 compare
stress Growth with Chloride 500 mM; with MOPS +0.5 +3.3 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +3.3 compare
temperature shift Temperature shift 10_to_21; with MOPS +0.5 +4.0 compare
carbon source 2-Methylbutanoic (C) +0.5 +3.9 compare
stress Growth with Chloride 500 mM; with MOPS +0.6 +3.7 compare
nitrogen source no extra (N) +0.6 +4.6 compare
nitrogen source Propiolactam (N) +0.6 +4.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.4 compare
nitrogen source NAG (N) +0.6 +4.6 compare
nitrogen source NAG (N) +0.6 +4.8 compare
nitrogen source NAG (N) +0.6 +4.8 compare
stress Growth with Chloride 500 mM; with MOPS +0.6 +4.0 compare
nitrogen source NAG (N); with MOPS +0.7 +3.4 compare
carbon source ferulate (C); with MOPS +0.7 +3.4 compare
nitrogen source no extra (N) +0.7 +5.9 compare
nitrogen source no extra (N) +0.8 +6.5 compare