Fitness data for PP_2357 in Pseudomonas putida KT2440

putative Type 1 pili protein CsuB
SEED: Sigma-fimbriae uncharacterized subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -1.1 -3.0 compare
carbon source D-Glucose (C); with MOPS -0.9 -2.8 compare
phage P. putida Missley MOI 0.1 -0.8 -1.3 compare
nitrogen source Ammonium chloride (N); with MOPS -0.8 -2.2 compare
nitrogen source Urea (N) -0.8 -2.0 compare
temperature shift Temperature shift 30_to_25 -0.7 -1.4 compare
no stress control Growth with no stress -0.7 -1.4 compare
temperature Growth at 25C -0.7 -1.8 compare
temperature shift Temperature shift 30_to_4 -0.7 -2.5 compare
nitrogen source nitrogen source nitrate 5mM -0.7 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.0 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -0.6 -2.9 compare
no stress control Growth with no stress -0.6 -1.8 compare
pH Growth at pH8 and (C) D-Glucose -0.6 -2.3 compare
stress Cholinium lysinate 10 vol% +0.6 +1.9 compare
carbon source Tween 20 (C) +0.6 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +1.2 compare
stress Cholinium dihydrogen phosphate 10 vol% +0.7 +1.8 compare
nitrogen source nitrite (N) +0.7 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.9 compare