Fitness data for PP_2343 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -3.3 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.5 -2.5 compare
temperature Growth at 30C -0.4 -2.4 compare
carbon source Valeric (C) -0.4 -1.5 compare
carbon source 1,3-Butandiol (C) -0.4 -1.5 compare
pH pH 4 -0.4 -1.8 compare
pH pH 5 -0.4 -1.4 compare
carbon source Glutaric (C) -0.3 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.3 -2.0 compare
phage PUT8 MOI 0.1 +0.3 +1.7 compare
nitrogen source D-2-Aminobutyric (N) +0.3 +1.5 compare
nitrogen source Hydantoin (N) +0.3 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +1.6 compare
nitrogen source Urea (N); with MOPS +0.4 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4 +2.6 compare
pH Growth at pH6 and (C) D-Glucose +0.4 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.2 compare