Fitness data for PP_2283 in Pseudomonas putida KT2440

Tail tubular protein A
SEED: Phage tail fibers

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Myristic (C) -0.7 -1.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.6 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.9 compare
pH Growth at pH7 and (C) D-Glucose -0.5 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -2.0 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.5 -2.4 compare
carbon source D-Glucose (C) -0.5 -2.1 compare
stress R2A with Fusaric 240 ug/mL -0.5 -2.6 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.5 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -1.9 compare
pH pH 7 +0.5 +1.6 compare
phage P. putida Sci small MOI 0.1 +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.3 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6 +1.7 compare
phage P. putida PUT 7 MOI 1 +0.6 +1.7 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.6 +1.7 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.3 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.7 +1.8 compare
pH pH 8 +0.7 +1.9 compare