Fitness data for PP_2266 in Pseudomonas putida KT2440

DNA-directed RNA polymerase, bacteriophage and mitochondrial type
SEED: DNA-directed RNA polymerase (EC 2.7.7.6)
KEGG: DNA-directed RNA polymerase, mitochondrial

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.5 compare
no stress control Growth with no stress -0.3 -1.6 compare
pH Valerolactone (C) pH 6.5 -0.3 -2.0 compare
carbon source D-Glucose (C); with MOPS -0.3 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
phage P. putida PUT10 MOI 1 +0.3 +2.1 compare
pH Growth at pH7 and (C) Trisodium citrate +0.3 +1.6 compare
stress Growth with Chloride 500 mM +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.5 compare
carbon source Glucose (C) (20mM) +0.3 +2.3 compare
phage P. putida South MOI 10 +0.3 +1.8 compare
stress Growth with Chloride 500 mM; with MOPS +0.3 +2.1 compare
pH Growth at pH8 and (C) Trisodium citrate +0.3 +2.3 compare
phage P. putida Sci Big MOI 0.1 +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.8 compare
phage P. putida Missley MOI 0.1 +0.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.8 compare