Fitness data for PP_2253 in Pseudomonas putida KT2440

Transcriptional regulator, GntR family
SEED: Transcriptional regulator, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -6.7 -2.5 compare
phage PUT 8 MOI 1 -6.6 -2.3 compare
pH Growth at pH7 and (C) D-Glucose -6.4 -2.2 compare
phage P. putida Sci small MOI 0.1 -4.2 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -4.1 -2.3 compare
nitrogen source Urea (N) -2.7 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.7 -1.7 compare
nitrogen source Urea (N) -2.6 -1.9 compare
carbon source Sebacic (C) -2.6 -2.1 compare
carbon source Ethyl decanoate and D-Glucose (C)s -2.5 -2.3 compare
pH Growth at pH9 and (C) Trisodium citrate -2.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.3 -2.2 compare
carbon source butyrate (C) -2.3 -2.6 compare
stress Growth with Chloride 500 mM -2.1 -1.9 compare
carbon source Protocatechuic Acid (C) -2.1 -2.1 compare
pH Growth at pH7 and (C) Trisodium citrate -2.1 -1.3 compare
phage P. putida South MOI 10 -1.9 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.0 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.0 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.0 +2.6 compare