Fitness data for PP_2220 in Pseudomonas putida KT2440

C4-type zinc finger protein, DksA/TraR family
SEED: C4-type zinc finger protein, DksA/TraR family
KEGG: DnaK suppressor protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -1.5 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.5 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.4 -3.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.3 -2.6 compare
pH Growth at pH6 and (C) Trisodium citrate -1.2 -1.6 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -1.2 -3.2 compare
micoeukaryotes C.elegans, mixed culture-2 -1.2 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -2.5 compare
micoeukaryotes C.elegans, mixed culture-1 -1.1 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.0 -2.7 compare
pH pH 9 -1.0 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.6 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.3 compare
stress 3-methyl-1-butanol 0.4 vol% +1.1 +5.1 compare
phage P. put South MOI 10 +1.2 +3.2 compare