Fitness data for PP_2219 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Oxidoreductase, short chain dehydrogenase/reductase family (EC 1.1.1.100)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source Propandiamine (N) -1.5 -2.1 compare
phage P. putida Sci small MOI 0.1 -1.0 -1.8 compare
nitrogen source Ammonium chloride (N) -0.9 -2.2 compare
pH D-Glucose (C) pH 6 -0.9 -2.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -2.3 compare
anaerobic m9 anaerobic M9 -0.8 -2.1 compare
carbon source Valeric (C) +0.8 +1.8 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.8 +3.3 compare
phage P. put PUT 10 MOI 10 +0.9 +2.8 compare
phage P. put PUT 10 MOI 0.1 +0.9 +4.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.9 +2.9 compare
phage P. putida South MOI 10 +0.9 +2.0 compare
carbon source ferulate (C); with MOPS +0.9 +1.9 compare
phage PUT8 MOI 0.1 +0.9 +3.0 compare
temperature shift Temperature shift 30_to_25 +0.9 +3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.0 +2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +1.0 +2.3 compare
nitrogen source D-2-Aminobutyric (N) +1.1 +1.9 compare
pH pH 6 +1.3 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.4 +2.4 compare