Fitness data for PP_2212 in Pseudomonas putida KT2440

Leucine-rich repeat domain protein
SEED: leucine-rich repeat domain protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
phage PUT 8 MOI 1 -0.3 -1.5 compare
pH pH 7 -0.3 -1.7 compare
carbon source D-Glucose (C) -0.2 -1.5 compare
nitrogen source nitrogen source nitrite 0.5mM -0.2 -1.7 compare
phage P. putida Sci Big MOI 0.1 -0.2 -1.4 compare
carbon source Beta-alanine (C) -0.2 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.2 -1.4 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.2 +1.6 compare
temperature shift Temperature shift 30_to_4 +0.2 +1.8 compare
phage P. putida Sci small MOI 0.1 +0.2 +1.2 compare
carbon source D-Glucose (C) +0.2 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.2 +1.2 compare
temperature Growth at 25C +0.2 +1.6 compare
stress R2A with Fusaric 480 ug/mL +0.2 +1.8 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.3 +1.7 compare
carbon source Myristic (C) +0.3 +1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.5 compare
carbon source ferulate (C); with MOPS +0.3 +1.7 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.9 compare