Fitness data for PP_2194 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.6 -3.4 compare
carbon source L-Leucine (C) -0.8 -1.6 compare
carbon source D-Lysine 10 mM (C) -0.7 -3.7 compare
temperature Growth at 30C; with MOPS -0.7 -2.1 compare
phage P. putida Sci Big MOI 0.1 -0.6 -1.5 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -1.8 compare
carbon source Myristic (C) -0.6 -1.7 compare
pH pH 9 -0.6 -1.9 compare
nitrogen source nitrogen source nitrite 1mM -0.5 -1.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.5 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.2 compare
carbon source Heptanoic (C) +0.6 +3.1 compare
carbon source L-Phenylalanine 5 mM (C) +0.6 +2.5 compare
phage P. putida PUT 7 MOI 1 +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +1.8 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +2.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +1.1 +3.2 compare