Fitness data for PP_2185 in Pseudomonas putida KT2440

putative Formate dehydrogenase, alpha subunit
SEED: NAD-dependent formate dehydrogenase alpha subunit
KEGG: formate dehydrogenase, alpha subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.6 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -2.2 compare
temperature shift Temperature shift 10_to_21; with MOPS -0.4 -2.1 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -1.8 compare
stress Growth with Chloride 500 mM -0.4 -2.2 compare
phage P. putida PUT 7 MOI 1 -0.3 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3 -1.3 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.5 compare
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.8 compare
carbon source Nonanoic (C) -0.3 -1.5 compare
carbon source DL-3-Hydroxyisobutyric (C) -0.3 -2.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.3 +2.4 compare
stress Growth with Chloride 500 mM; with MOPS +0.3 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +2.5 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.7 compare