Fitness data for PP_2169 in Pseudomonas putida KT2440

tRNA-dihydrouridine synthase A
SEED: tRNA dihydrouridine synthase A
KEGG: tRNA-dihydrouridine synthase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.5 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.3 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.3 -2.9 compare
temperature shift Temperature shift 30_to_4 -1.2 -3.6 compare
temperature Growth at 30C; with MOPS -1.2 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -1.1 -2.6 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -1.1 -4.6 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Thr -1.0 -4.4 compare
temperature shift Temperature shift 30_to_4; with MOPS -1.0 -4.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.0 -4.2 compare
temperature shift Temperature shift 30_to_4 -0.9 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.9 -4.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -3.4 compare
pH Valerolactone (C) pH 6.5 +0.9 +3.2 compare
phage P. putida PUT10 MOI 10 +0.9 +3.7 compare
pH Growth at pH8 and (C) D-Glucose +0.9 +2.3 compare
phage P. put PUT 10 MOI 10 +1.0 +4.6 compare
phage PUT8 MOI 0.1 +1.0 +4.2 compare
phage P. put PUT 10 MOI 0.1 +1.0 +5.1 compare