Fitness data for PP_2150 in Pseudomonas putida KT2440

putative Thiamine biosynthesis lipoprotein
SEED: Thiamin biosynthesis lipoprotein ApbE
KEGG: thiamine biosynthesis lipoprotein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.5 -2.2 compare
nitrogen source nitrogen source nitrate 5mM -0.9 -2.2 compare
nitrogen source nitrate (N) -0.9 -2.6 compare
carbon source DL-3-Hydroxyisobutyric (C) -0.8 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -3.2 compare
phage P. putida Sci small MOI 0.1 -0.8 -1.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.4 compare
pH pH 8 -0.7 -1.5 compare
nitrogen source Ammonium chloride (N) -0.7 -1.8 compare
micoeukaryotes C.elegans, mixed culture-2 -0.7 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.2 compare
carbon source 1,3-Hexanediol (C) -0.7 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.8 compare
phage P. put South MOI 1 +0.7 +3.0 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.7 +1.8 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.7 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.2 compare
pH Growth at pH9 and (C) Trisodium citrate +0.7 +2.3 compare