Fitness data for PP_2121 in Pseudomonas putida KT2440

putative Lipoprotein
SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.1)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -4.8 -2.7 compare
carbon source 5-Aminovaleric 10 mM (C) -3.7 -3.5 compare
phage P. putida Missley MOI 0.1 -3.5 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.2 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.2 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.2 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -2.9 -2.0 compare
nitrogen source nitrate (N) -2.8 -2.2 compare
temperature Growth at 30C; with MOPS -2.8 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.7 -2.0 compare
nitrogen source nitrogen source nitrite 1mM -2.6 -2.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -2.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.4 -2.6 compare
phage moi 100 Time6-phageFRS -2.2 -2.5 compare
pH Growth at pH8 and (C) D-Glucose -2.1 -1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +2.4 +2.3 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +2.5 +2.2 compare
carbon source carbon source 4-vinylphenol 0.01 mM +2.7 +2.6 compare
carbon source carbon source 4-vinylphenol 0.1 mM +2.8 +2.6 compare
pH pH 8 +3.0 +2.7 compare