Fitness data for PP_2104 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: Probable transmembrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -2.3 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -1.4 compare
temperature Growth at 25C; with MOPS -0.7 -1.9 compare
nitrogen source Propiolactam (N) -0.7 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.7 compare
nitrogen source NAG (N); with MOPS -0.6 -1.0 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.9 compare
carbon source 3-Hydroxydecanoic (C) -0.6 -1.6 compare
carbon source L-Glutamic (C) -0.6 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.6 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.5 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -1.4 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.5 -1.8 compare
carbon source Ethyl decanoate (C) -0.5 -2.3 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.5 +2.2 compare
carbon source butyrate (C) +0.6 +2.1 compare
carbon source 1-Pentanol (C) +0.7 +3.4 compare
carbon source D-Glucose (C) 5 mM +0.7 +3.1 compare
pH Growth at pH7 and (C) D-Glucose +0.7 +2.0 compare