Fitness data for PP_2055 in Pseudomonas putida KT2440

putative isomerase
SEED: FIG00958979: hypothetical protein
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.6 -1.5 compare
phage P. putida PUT 7 MOI 1 -1.1 -1.1 compare
pH Growth at pH8 and (C) D-Glucose -1.1 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.0 -3.2 compare
pH Growth at pH7 and (C) Trisodium citrate -1.0 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.9 -2.4 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.9 -1.9 compare
phage P. putida South MOI 10 -0.9 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +2.1 compare
carbon source Acetate Carbon Source (5mM) +0.9 +2.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.9 +2.9 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.9 +4.5 compare
nitrogen source nitrogen source nitrite 0.5mM +0.9 +2.0 compare
temperature Growth at 25C; with MOPS +0.9 +2.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +1.0 +3.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.0 +2.1 compare
carbon source Myristic (C) +1.1 +2.6 compare
nitrogen source nitrogen source nitrate 20mM +1.3 +4.8 compare