Fitness data for PP_2026 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.6 -2.2 compare
phage P. putida PUT 7 MOI 1 -1.6 -3.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -3.2 compare
phage P. putida Missley MOI 0.1 -1.1 -1.9 compare
carbon source Tween 20 (C) -0.9 -2.9 compare
phage PUT 8 MOI 1 -0.9 -1.8 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -1.7 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.7 -2.2 compare
nitrogen source Propandiamine (N) -0.7 -2.1 compare
carbon source Myristic (C) -0.6 -1.7 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -0.6 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.6 -2.3 compare
carbon source Valeric (C) -0.6 -2.4 compare
nitrogen source nitrogen source nitrite 0.5mM -0.6 -1.2 compare
carbon source L-Phenylalanine 5 mM (C) -0.6 -2.5 compare
carbon source Octanoic (C) -0.6 -2.2 compare
stress Geraniol 1 vol% -0.6 -2.5 compare
temperature Growth at 25C; with MOPS +0.6 +1.9 compare
pH Growth at pH6 and (C) Trisodium citrate +0.7 +3.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.4 compare