Fitness data for PP_2024 in Pseudomonas putida KT2440

Exonuclease SbcC
SEED: Exonuclease SbcC
KEGG: exonuclease SbcC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.7 -3.6 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.9 -4.6 compare
stress Growth with Chloride 500 mM -0.7 -3.0 compare
nitrogen source Propandiamine (N) -0.6 -2.7 compare
stress Growth with Chloride 500 mM; with MOPS -0.6 -2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.6 -2.1 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.6 -2.7 compare
stress Formaldehyde 0.03125 vol% -0.6 -3.2 compare
temperature shift Temperature shift 30_to_4 -0.6 -3.1 compare
pH pH 5 -0.6 -1.8 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.5 compare
carbon source Valerolactone (C) -0.5 -2.3 compare
nitrogen source nitrogen source nitrite 1mM -0.5 -1.8 compare
pH Growth at pH7 and (C) Trisodium citrate -0.5 -1.4 compare
nitrogen source nitrogen source nitrite 0.5mM -0.5 -1.9 compare
stress R2A with Fusaric 240 ug/mL -0.5 -1.9 compare
nitrogen source Propiolactam (N) -0.5 -2.3 compare
temperature shift Temperature shift 30_to_4 -0.5 -2.3 compare