Fitness data for PP_1982 in Pseudomonas putida KT2440

small heat shock protein IbpA
SEED: 16 kDa heat shock protein A
KEGG: molecular chaperone IbpA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Myristic (C) -1.0 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -3.3 compare
phage P. putida Sci small MOI 0.1 -0.9 -1.6 compare
phage P. putida Sci Big MOI 0.1 -0.8 -1.3 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.8 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.3 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.7 -2.4 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.7 -1.8 compare
carbon source L-Lysine (C) -0.6 -1.7 compare
pH pH 6 -0.6 -1.5 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +1.7 compare
stress Growth with Chloride 500 mM; with MOPS +0.7 +2.0 compare
pH Growth at pH6 and (C) D-Glucose +0.7 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 +1.6 compare
pH Growth at pH6 and (C) Trisodium citrate +0.8 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.9 +2.2 compare
carbon source Valerolactone (C) +1.1 +1.6 compare
nitrogen source D-2-Aminobutyric (N) +1.2 +3.1 compare