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  • Fitness data for PP_1962 in Pseudomonas putida KT2440

    Site-specific recombinase, phage integrase family

    Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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    group condition fitness t score  
    pH Valerolactone (C) pH 6.5 -0.8 -2.6 compare
    pH Growth at pH7 and (C) Trisodium citrate -0.7 -2.0 compare
    micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -2.6 compare
    soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -3.6 compare
    carbon source Trisodium citrate (C) -0.6 -2.0 compare
    phage P. putida South MOI 1 +0.6 +2.8 compare
    supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +3.0 compare
    pH pH 9 +0.6 +2.2 compare
    temperature shift Temperature shift 10_to_30; with MOPS +0.6 +2.7 compare
    phage P. put South MOI 0.1 +0.6 +2.8 compare
    pH Valerolactone (C) pH 6.5 +0.6 +2.6 compare
    phage PUT8 MOI 0.1 +0.6 +2.3 compare
    phage PUT 8 MOI 1 +0.6 +2.4 compare
    nitrogen source D-2-Aminobutyric (N) +0.7 +1.9 compare
    phage P. put South MOI 0.1 +0.7 +3.4 compare
    phage P. putida Sci Big MOI 0.1 +0.8 +2.3 compare
    carbon source 1,3-Butandiol (C) +0.8 +3.3 compare
    phage P. putida Missley MOI 0.1 +0.8 +3.3 compare
    phage P. putida Sci small MOI 0.1 +0.9 +3.0 compare
    phage P. putida PUT 7 MOI 1 +1.0 +4.5 compare