Fitness data for PP_1957 in Pseudomonas putida KT2440

Oxidoreductase, Pdr/VanB family
SEED: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.3 +2.0 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.3 +1.7 compare
nitrogen source nitrite (N) +0.3 +2.5 compare
nitrogen source Ammonium chloride (N); with MOPS +0.3 +2.1 compare
carbon source Valerolactone (C) +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
phage P. putida Sci Big MOI 0.1 +0.4 +1.9 compare
stress R2A with Fusaric 240 ug/mL +0.4 +2.0 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +2.6 compare
phage P. putida compost MOI 0.1 +0.4 +2.8 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.4 +2.7 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.3 compare
temperature shift Temperature shift 10_to_21; with MOPS +0.5 +3.5 compare
phage P. putida Sci small MOI 0.1 +0.7 +3.5 compare
phage P. putida PUT 7 MOI 1 +0.8 +5.1 compare
phage P. putida Missley MOI 0.1 +1.0 +5.8 compare