Fitness data for PP_1950 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: putative cytochrome P450 hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -3.3 compare
nitrogen source nitrate (N) -0.6 -1.6 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.8 compare
carbon source 1,3-Butandiol (C) -0.5 -1.8 compare
pH pH 8 -0.5 -2.2 compare
carbon source L-Lysine (C) -0.5 -2.6 compare
stress MOPS minimal media_Glucose20mM with Chloride 200 mM -0.5 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.5 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +2.1 compare
phage PUT8 MOI 0.1 +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.1 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +2.6 compare
phage P. putida PUT 7 MOI 1 +0.7 +3.0 compare
phage P. putida Sci small MOI 0.1 +0.8 +3.7 compare
phage P. putida Missley MOI 0.1 +1.1 +4.8 compare